Native RNA sequencing in fission yeast reveals frequent alternative splicing isoforms
收藏NIAID Data Ecosystem2026-03-13 收录
下载链接：
https://figshare.com/articles/dataset/Native_RNA_sequencing_in_fission_yeast_reveals_frequent_alternative_splicing_isoforms/19368146
下载链接
链接失效反馈官方服务：
资源简介：
Spom_dRNA_cleanreads.fa.gz: Reads of dRNA after cleaning with Illumina reads and TranscriptClean.
Spom_dRNA_sorted.bam: Alignment of clean reads to S. pombe genome.
Spom_dRNA_Stringtie_transcriptome.gtf: Transcript assemblies and genomic coordinates generated by StringTie from dRNA reads.
Spom_dRNA_Stringtie_transcriptome.fa: Sequences extracted from the annotation file generated by StringTie from dRNA reads.
Spom_isoforms.gtf: Annotation file for genes with alternative isoforms not annotated in Pombase.
Spom_novel_transcripts.gtf: Annotation file for novel transcripts not annotated in Pombase.
Supplemental_Table_S9.tsv: Information of translated ORFs in ncRNAs.
Spom_dRNA_5UTR_Stringtie.gtf: Genomic coordinates of new 5'UTR regions in S. pombe.
Spom_dRNA_5UTR_Stringtie.fa: Sequences extracted from the annotation files of 5'UTR regions.
Spom_dRNA_3UTR_Stringtie.gtf: Genomic coordinates of new 3'UTR regions in S. pombe.
Spom_dRNA_3UTR_Stringtie.fa: Sequences extracted from the annotation files of 3'UTR regions.
Supplemental_Table_S8.xlsx: Information on the transcripts identified with dRNA, new isoforms, novel transcripts and new UTR regions.
创建时间：
2022-03-16
