NATRICINE

# Data from the NATRICINE project led by V.Deepak ([e-mail]), funded by a Marie Skłodowska-Curie Action. These data have been used in several papers: 1. Deepak. V., Cooper, N., Poyarkov, N.A., Kraus, F., Burin, G., Das,A., Snarayanan, S., Streicher, J.W., Smith, S.J., & Gower, D.J. 2021. Multilocus phylogeny, natural-history traits, and classification of natricine (Serpentes: Natricinae) snakes. Zoological Journal of the Linnaean Society. 2021, zlab099. DOI: 10.1093/zlab099. 2. Deepak. V., Gower, D.J. & Cooper, N. 2022. Diet and habit explain head-shape convergences in natricine snakes. Journal of Evolutionary Biology. More details can be found at https://github.com/nhcooper123/NATRICINE-traits, https://github.com/nhcooper123/NATRICINE-ecomorph, and in the papers themselves. ## Data for paper 1 (Zoological Journal of the Linnaean Society) 1. *natricine-251tips.fas* 2. *Mol-dating-310tips.nex* 3. *Natricine-MLphylogeny250tips.tre* 4. *120tipnewick* 5. *TreePL_natricine_dated.tre* 6. *Totnat-geo-data* 7. *Tot-nat-geo-data-8areas* ## Data for paper 2 (Journal of Evolutionary Biology) ### Linear analyses (main text) 1. *new_datedtree-LM.nexus*. Dated/time-calibrated phylogeny used in LM analyses. 2. *linear-species-means-LSR.csv*. Species means for head shape variables used in analyses. 3. *metadata-data-natricine-LM.csv*. Raw specimen level measurements, along with additional data needed for analyses, including putative ecomorph. 4. *missing_taxa_data.csv*. List of missing taxa used to create pruned phylogeny for analyses. 5. *snakepca-LSR.csv*. PC (principal components) data used in analyses. ### GMM analyses (supplemental) 1. *new_datedtree-GMM.nexus*. Dated/time-calibrated phylogeny used in GMM analyses. 2. *metadata-data-natricine-GMM.csv*. Additional data needed for analyses, including putative ecomorph. 3. *natricine_landmarks.TPS*. Raw landmarks from snake heads used in GMM analyses. 4. *sliders-natricine-landmarks.csv*. Slider definitions for GMM analyses. 5. *snake-data-pca-GMM.csv*. PC (principal components) data used in analyses. 6. *GMM images.zip*. Example images for GMM analyses. We are only able to upload those taken from NHM specimens. ## Data for both papers We also include the full natural history dataset collected for this project, along with the references used to build it (`Natricine-natural-history-data.csv` and `Natricine-natural-history-data-references.csv`), used in both paper, and the time calibrated phylogeny with no species added or pruned *datedtree.nexus*. *More details and metadata are available with each resource - click on the resource to access.*