ESBL-SpecializedProteomics-Data - Web Archive

The Epithelial Systems Biology Laboratory (DIR,NHLBI,NIH), headed by Mark Knepper, has developed a number of databases archiving previously published proteomic data in kidney and have made them available to the community. The .zip file contains web architecture for access to "Specialized Proteomic Data". Full documentation is included on the various pages. The various links allow users to access databases with capability to search, browse or download data sets. Please see https://esbl.nhlbi.nih.gov/Databases/KSBP2/Targets/SpecializedProteomics.html for current implementation as of April 17, 2026. The following elements are included:1. Quantitative Nuclear Proteomics in mpkCCD Cells (SILAC): Vasopressin Response (Schenk et al., 2012)2. mpkCCD Nuclear Phosphoproteome: Effect of Vasopressin (Bolger et al., 2012)3. mpkCCD Nucleus Proteome Database (Schenk et al., 2012)4. Rat Renal Inner Medullary Collecting Duct Nuclei: Effect of Vasopressin (Pickering et al., 2016)5. Rat Renal Inner Medullary Collecting Duct Cytoplasm (Pickering et al., 2016)6. Transcription Factors in Rat IMCD Nuclei (Pickering et al., 2016)7. Virtual Western Blots for Rat IMCD Nuclei (8266 Proteins) (Pickering et al., 2016)8. Total and Phospho Proteomics: PKA Double Knockout in mpkCCD (Isobe et al., 2017)9. Effect of PKA Catalytic Alpha Knockout in mpkCCD on Protein Abundances (Raghuram et al., 2020)10. Effect of PKA Catalytic Beta Knockout in mpkCCD on Protein Abundances (Raghuram et al., 2020)11. Protein Half-Lives in Renal mpkCCD Epithelial Cells: Effect of Vasopressin (Sandoval et al., 2013)12. Effect of Vasopressin on Protein Translation Rates (Sandoval et al., 2013)13. Urea Channel UT-A1 Interactome (Chou et al., 2018)14. Water Channel AQP2 Interactome (Chou et al., 2018)15. Beta-Catenin Interactome in IMCD Nucleus (Hwang et al., 2017)16. Renal Inner Medullary Carbamylation Database (Claxton et al., 2013)17. Renal Inner Medullary Protein Acetylation Database (Claxton et al., 2013)18. Renal Inner Medullary Protein Ubiquitylation Database (Claxton et al., 2013)19. Rat Renal IMCD Lysine Acetylation (Hyndman et al., 2018)20. Administration on Protein Abundances: Microdissected Rat Cortical Collecting Ducts (Sung et al., 2019)21. IMCD Proteomics: Hypercalcemia Induced Nephrogenic Diabetes Insipidus (Khositseth et al., 2017)22. IMCD Proteomics: Hypokalemia Induced Nephrogenic Diabetes Insipidus (Khositseth et al., 2015)23. IMCD Proteomics: Bilateral Ureteral Obstruction (Somparn et al., 2020)24. Rat Proximal Convoluted Tubule Proteome - Metabolic Acidosis (Curthoys et al., 2012-3)<br><br>