Pangenome-scale annotation of mycobacteriophages for dissecting phage–host interactions based on a Sequence Clustering and Structural Homology analysis strategy

This record contains data related to the article "Pangenome-scale annotation of mycobacteriophages for dissecting phage–host interactions based on a Sequence Clustering and Structural Homology analysis strategy." Supplemental Table 1: Mycobacteriophages used in this studySupplemental Table 2: Dark structures of Mycobacteriophage searching CATH structure domain classification database resultsSupplemental Table 3: Protein-protein interaction prediction result of phage Anti-CRISPR proteins and M. tuberculosis CRISPR-related genesSupplemental Table 4: Protein-protein interaction prediction result of phage Anti-toxin proteins and M. tuberculosis toxin genesSupplemental Table 5: Protein-protein interaction prediction result of phage replication-, transcription-, and translation proteins and M. smegmatis replication-, transcription-, and translation related genesSupplemental Table 6: Protein-protein interaction prediction result of phage replication-, transcription-, and translation proteins and M. smegmatis replication-, transcription-, and translation related genes, ipTM+pTM threshold = 0.7Supplemental Table 7: GO category of mycobacteria replication, transcription, and translation geneSupplemental Table 8: Mycobacteria anti-toxin genes used in this studySupplemental Table 9: Anti-CRISPR genes used in this studySupplemental Table 10: Other Anti-defense genes used in this studySupplemental Table 11: mycoPHG_clu_model_db compared to BFVDSupplemental Table 12: Result of mycoPHG_clu_model_db compared to structure of other anti-defence proteinsSupplemental Table 13: Result of mycoPHG_clu_model_db compared to structure of antitoxin and acr proteinsSupplemental Table 14: Mycobacteriophage replication-, transcription-, and translation associate proteins used in protein-protein interaction predictionSupplemental Table 15: DeepFRI-based EC number prediction for mycobacteriophage structurally related proteins