Supplementary information (MD simulations): Structural and mechanistic basis for a Clostridia ribosome stalling peptide that employs diverse modes of translation arrest.

This dataset contains run input files and final coordinates for all MD simulations as well as code and data used for the creation of Figure 8 and ED Figure 7. MD input files The run-input files were created with GROMACS 2025 and will need to be run with the same version. Instructions for running figure creation scripts Install pixi (https://pixi.sh/dev/installation/) Run pixi shell to activate the software environment (Installs R and additional packages in the environment) Run the scripts.