Leontodon longirostris genome draft 418Mb
收藏Figshare2020-07-24 更新2026-04-28 收录
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https://figshare.com/articles/dataset/Leontodon_longirostris_genome_draft_418Mb/12706247
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资源简介:
1-Leontodon-genome-draft-418Mb.fasta: sequences in FASTA format of the 410,019 scaffolds and contigs that were considered the 418 Mb genome draft for Leontodon longirostris. 2-Maker853GeneModels-in1007LongestFragments.gff: the 853 MAKER-based gene models deduced from the 1007 longest (>10 kb) fragments of the 418 Mb genome draft. 3-FunctionalAnnot-MakerGeneModels-in1007LongestFragments.tsv: Functional annotation of the predicted 853 proteins deduced from MAKER-based gene models. 4-Reconstructed-472ChimaericModels.fasta: sequences in FASTA format of the 472 GeneAssembler-based gene models reconstructed using the short ( 5-ShortGenomeFragments-in472ChimaericModels.tsv: list of contigs and scaffolds from the 418 Mb genome draft that were used to reconstruct each chimaeric, GeneAssembler-based gene model. 6-GeneAssemblerChimaericModels-in472ChimaericModels.gff: annotation of the 472 GeneAssember-based, chimaeric gene models by genome location. 7-FunctionalAnnotation472ChimaericModels.xlsx: comprehensive functional annotation of the 472 GeneAssember-based, chimaeric gene models, including the predicted protein length, the number of exons identified in that gene model, a fragmentation index (0-1 range, where 0 means that all exons in the model come from one single sequence contig, and 1 means that each exon comes from a different contig) and the human-readable description of the predicted protein sequence taken from the GFF file.
创建时间:
2020-07-24



