Description of the terms of the mass balances.

We studied the dynamics of methane (CH4) and carbon dioxide (CO2) in a eutrophic tropical reservoir located in the Colombian Andes. Temporal and spatial dynamics were addressed through sampling during six field campaigns conducted throughout a two-year period. We monitored fluxes at the air-water interface, dissolved gas concentrations, physical and chemical properties of the water column, microstructure profiles of turbulence, and meteorological conditions. Throughout the study period, the reservoir was a persistent source of CH4 to the atmosphere with higher emissions occurring in the near inflow region. During periods of low water levels, both the emissions and surface concentrations of CH4 were higher and more spatially heterogeneous. The measured CO2 fluxes at the air-water interface changed direction depending on the time and location, showing alternating uptake and emissions by the water surface. Mass balances of dissolved CH4 in the surface mixed layer revealed that biochemical reactions and gas evasion were the most significant processes influencing the dynamics of dissolved CH4, and provided new evidence of possible oxic methane production. Our results also suggest that surface CH4 concentrations are higher under more eutrophic conditions, which varied both spatially and temporally.