DRIP-sequencing of HAP1 cells

NIAID Data Ecosystem2026-05-02 收录

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https://www.ncbi.nlm.nih.gov/sra/SRP578683

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The study was designed to map R-loops (DNA:RNA hybrids) in chronic myeloid leukemia (CML) derived from HAP1 WT and knockout cells.

创建时间：

2025-04-17

ATAC sequencing of HAP1 cells. ATAC sequencing of HAP1 cells

We analysed the global effect of CHD3-KO and SENP1-KO HAP1 cell lines compared to control cell line, on chromatin accessibility using ATAC-seq. Overall design: CRISPR-Cas9-generated knockout cells for

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ATAC sequencing of HAP1 cells

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DRIP-sequencing U2OS. DRIP-sequencing U2OS

Here, we identify that a human DNA helicase RTEL1, which is known to play a role in the maintenance of telomeres by interacting with proteins in the shelterin complex by resolving G4 quadruplexes, is

NIAID Data Ecosystem20

ATAC sequencing of HAP1 cells

We analysed the global effect of CHD3-KO and SENP1-KO HAP1 cell lines compared to control cell line, on chromatin accessibility using ATAC-seq. CRISPR-Cas9-generated knockout cells for CHD3 and SENP1

NIAID Data Ecosystem20

DRIP-sequencing of Human Jurkat and T-cells

Raw sequenced reads for Human Jurkat and T-cells generated by DNA:RNA Immunoprecipitation followed by next-generation-sequencing (DRIP-seq with S9.6 antibody).

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