Supplementary material for: Phylogeny and biogeography of the ancient spider family Filistatidae (Araneae) is consistent both with long-distance dispersal and vicariance following continental drift
收藏NIAID Data Ecosystem2026-03-13 收录
下载链接:
https://zenodo.org/record/6113180
下载链接
链接失效反馈官方服务:
资源简介:
Raw data and input files for phylogenetic and biogeographic analysis of the article "Phylogeny and biogeography of the ancient spider family Filistatidae (Araneae) is consistent both with long-distance dispersal and vicariance following continental drift".
Supplementary material S1. Matrix of phenotypic characters in .ss format.
Supplementary material S2. Alignment of COI sequences in fasta format..
Supplementary material S3. Alignment of H3 sequences in fasta format.
Supplementary material S4. Alignment of 16S sequences in fasta format before trimming with gblocks.
Supplementary material S5. Alignment of 28S sequences in fasta format before trimming with gblocks.
Supplementary material S6. Input for running parsimony analysis using TNT (phenotypic data only).
Supplementary material S7. Input for running Bayesian inference using MrBayes (phenotypic data only).
Supplementary material S8. Input for running parsimony analysis using TNT (sequence data only).
Supplementary material S9. Input for running Bayesian inference using MrBayes (sequence data only).
Supplementary material S10. Input for running parsimony analysis using TNT (total evidence).
Supplementary material S11. Input for running Bayesian inference using MrBayes (total evidence).
Supplementary material S12. Input for running parsimony analysis using TNT (total evidence, dataset with reduced number of terminals).
Supplementary material S13. Input for running Bayesian inference using MrBayes (total evidence, dataset with reduced number of terminals).
Supplementary material S14. Input for running Bayesian inference using MrBayes (total evidence) and estimating node ages using tip-dating.
Supplementary material S15. Input for running Bayesian inference using Beast (sequence data only) and estimating node ages using node-dating.
Supplementary material S16. Raw geographic distances among areas in each time slice and dispersal probability matrices for each biogeographic model.
Supplementary material S17. Inputs for estimating ancestral ranges and performing biogeographic stochastic maps for our dataset.
Supplementary material S18. Consensus tree found with parsimony analysis using TNT (phenotypic data only).
Supplementary material S19. Consensus tree found with Bayesian inference using MrBayes (phenotypic data only).
Supplementary material S20. Consensus tree found with parsimony analysis using TNT (sequence data only).
Supplementary material S21. Consensus tree found with Bayesian inference using MrBayes (sequence data only).
Supplementary material S22. Consensus tree found with parsimony analysis using TNT (total evidence).
Supplementary material S23. Consensus tree found with Bayesian inference using MrBayes (total evidence).
Supplementary material S24. Consensus tree found with parsimony analysis using TNT (total evidence, dataset with reduced number of terminals).
Supplementary material S25. Consensus tree found with Bayesian inference using MrBayes (total evidence, dataset with reduced number of terminals).
Supplementary material S26. Consensus tree found with Bayesian inference using MrBayes (total evidence) and with node ages estimated using tip-dating.
Supplementary material S27. Maximum clade credibility tree found with Bayesian inference using Beast (sequence data only) and with node ages estimated using node-dating.
创建时间:
2022-08-03



