Data for: "Repetitive Elements in Myriapoda: Genomic Diversity and Evolution"

This repository contains genome-wide annotations and summary analyses of repetitive elements identified across 37 myriapod genomes. These data support the analyses presented in "Repetitive Elements in Myriapoda: Genomic Diversity and Evolution". The dataset includes per-genome repeat annotations, a curated de novo repeat library, repeat landscape data, and summary tables used to generate the figures in the manuscript. Repeat annotations *_repeats.gff.gz: Genome-wide repeat annotations for each species generated using a RepeatMasker-based pipeline. Repeat library and classification myriapoda_de_novo_repeat_library.fa.gz: Curated de novo repeat family library used for genome annotation. repeatmasker_classification_mapping.csv.gz: Mapping table used to assign hierarchical TE classifications from RepeatMasker annotations. Repeat landscape data *_repeat_landscape.tsv.gz: Repeat landscape summaries for each species used to characterize repeat age distributions and generate landscape figures in the manuscript. Summary tables Aggregated repeat content statistics used for comparative analyses and figure generation. Files include summaries by: class order superfamily family subfamily type Key files: repeat_content_overall.tsv.gz: Includes all RepeatMasker annotations. repeat_content_overall_repetitive_elements_only.tsv.gz: Includes only bona fide repetitive elements (transposable elements and simple repeats), excluding low-complexity regions, pseudogenes, and artefacts annotated by RepeatMasker.