Supplemental Material for Harel et al., 2019

Figure S1 contains an illustration of a standard decision tree model. <br>Figure S2 contains an illustration of the InPhenotype algorithm.<br>Figure S3 contains results of applying InPhenotype on real data in yeast and mouse.<br>Figure S4 contains an illustration of the haplotype probabilities discretization pipeline.<br>Figure S5 contains performance comparisons.<br>Figure S6 shows InPhenotype's robustness to different method parameters.<br>Figure S7 illustrates the contribution of genetics data and the performance of InPhenotype in the presence and absence of a weighting scheme. <br>Figure S8 shows performance on additional analyses of synthetic datasets.<br>Figure S9 shows performance on various number of causal SNPs.<br>Figure S10 shows the molecular pathways of large modules which were discovered by InPhenotype.<br>Table S1 contains the gene-SNP pairs associated with yeast cell growth in response to Rapamycin. <br>Table S2 contains the gene-SNP pairs associated with mice weight loss following Influenza infection.