Boltz2 Structure Predictions of Proteinbase Design Submissions

Boltz2 results from bound complex structure predictions generated for selected Proteinbase submissions. Each binder design is written in an output directory with the Proteinbase unique identifier in the name (i.e. "boltz_results_config_<id>/") - hyperparameters used to generate each prediction are in the "lightning_logs/" sub-directory and predicted structures, confidence metrics, and pLDDT/pAE/PDE matrices are found within the "predictions/" sub-directory. 

results.tar.bz2

Results for 952 selected binder designs against multiple targets from a mix of Proteinbase collections (https://proteinbase.com/collections).

nipah_results.tar.bz2

Results for 83 Nipah binder designs from the Nipah Binder Competition (https://proteinbase.com/collections/nipah-binder-competition-results) - 3 independent predictions generated for each design to evaluate variability in confidence metrics.

rbx1_results.tar.bz2

Results for 150 RBX1 binder designs from the RBX1 Binder Design Competition (https://proteinbase.com/collections/gem-x-adaptyv-rbx1-binder-design-competition-results).