Repeat catalogs for TRGT
收藏资源简介:
This dataset contains various repeat catalogs for the Tandem Repeat Genotyping Tool (TRGT): pathogenic_repeats.hg38.bed contains annotations of 56 known pathogenic repeats. polymorphic_repeats.hg38.bed contains 171,146 polymorphic repeats. The original version of this catalog was made for short reads and is distributed under CC BY-SA 4.0 license. adotto_repeats.hg38.bed contains 937,122 repeats originally released by the Genome in a Bottle tandem repeat benchmarking project 10.5281/zenodo.7226352. Please consider citing TRGT preprint if you are using these data.
本数据集收录了适用于串联重复基因分型工具(Tandem Repeat Genotyping Tool,TRGT)的多套重复序列目录。其中,pathogenic_repeats.hg38.bed 包含56种已知致病串联重复的注释信息;polymorphic_repeats.hg38.bed 收录了171146条多态性串联重复序列。该目录的原始版本专为短读长测序设计,采用CC BY-SA 4.0许可协议进行分发。adotto_repeats.hg38.bed 包含937122条重复序列,其原始数据由基因组在瓶中(Genome in a Bottle)串联重复基准评测项目发布,关联DOI为10.5281/zenodo.7226352。若您使用本数据集,请引用TRGT的预印本论文。



