Table S3 from Molecular Profiling Reveals Unique Immune and Metabolic Features of Melanoma Brain Metastases

Table S3: Pathway Analysis of Intracranial and Subcutaneous Melanoma Xenografts. Results of EGSEA analyses of ICr (n=3) vs. SQ (n=3) tumors of 4 melanoma cell lines implanted into CD-1 nude mice. RNA-seq data were processed via Xenome to filter out contaminating mouse stromal signatures. "Gene Set" lists the database (MSigDB) and the specific collection of gene sets (Hallmark and c2: Curated) included in each analysis. Median rank was used to order the top 20 gene sets in each analysis. All gene sets listed have an adjusted p-value