All 277 analyzed gene trees as inferred in RAxML. The loci are labeled and arranged by descending order of locus length. All clade bootstraps ≥ 50 are plotted on branches.
Explanations for gene tree discordance with respect to a species tree are commonly attributed to deep coalescence (also known as incomplete lineage sorting [ILS]), as well as different evolutionary pr
Bootstrapped gene trees for all nitrogen-cycling genes included in this study. Trees were generated using RAxML-NG with at least 1000 bootstraps or until bootstraps converged, as determined using an M
