Additional file 1: Table S1. of Genome sequence of the ectophytic fungus Ramichloridium luteum reveals unique evolutionary adaptations to plant surface niche

Genome characteristics of R. luteum. Table S2. Species used in this comparative study. Table S3. The expression of 59 candidate effectors in R. luteum. Green fills represent the up-regulated genes on ectophytic growth. Table S4. Number of carbohydrate-active enzyme modules of R. luteum and 12 other fungi according to the CAZY database. GHs = Glycosyl hydrolases; GTs = Glycosyl transferases; CBMs = Carbohydrate-binding modules; CEs = Carbohydrate esterase; AAs = Auxiliary activities; PLs = Polysaccharide lyases. Table S5. Up-regulated genes involved in PCWDEs of R. luteum on the apple surface. Table S6. Nine secretory lipases show best-hit relationships with the fungi in NCBI nr database. Table S7. Orthologues and putative orthologues in response regulator-dependent osmotic and oxidative stress-response regulatory in R. luteum. Table S8. General features of data got by the high throughput transcriptome analysis. (XLS 72 kb)