Supplementary Files S1-S5
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<b>Supplementary File S1: Simulation parameter files and guide trees (ZIP archive)</b> <b>Supplementary File S2: PCA plot based on diversity of bi-allelic SNPs (PDF file). </b>Same projection as in Figure S5, with samples distinguished by different metadata: country of isolation, year of isolation, host immune status, body compartment of isolation ('respiratory' pools BAL and nasal rinse, 'blood' pools whole blood and plasma). <b>Supplementary File S3: Posterior probability and compatibility matrices of bipartitions in gene trees (XLSX spreadsheet)</b> <b>Supplementary File S4: Local LD index values along HCMV whole-genome alignment. (XLSX spreadsheet)</b> <b>Supplementary File S5: Trees of hyper-variable loci with episodes of positive selection highlighted (PDF file)</b>
提供机构:
figshare
创建时间:
2016-05-05



