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Expanding the set of residues that can match a single position in the input motif.

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https://figshare.com/articles/dataset/_Expanding_the_set_of_residues_that_can_match_a_single_position_in_the_input_motif_/281745
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When the position Ser214 in the input motif (Ser195, His57, Ser214) can be matched by a Ser or Tyr, Tyr36 has a much better spatial orientation with respect to Ser49 and His48 as compared to Ser120 in the P14A protein (PDBid:1CFE). The distances are specified in the reference protein (PDBid:1B0F) in A. For the remaining, we show the deviation from the reference value. Potential differences are in units of kT/e (k is Boltzmann’s constant, T is the temperature in K and e is the charge of an electron). They are absolute values and not shown as deviations.
创建时间:
2012-07-11
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