Additional file 15 of A comprehensive analysis of gut and skin microbiota in canine atopic dermatitis in Shiba Inu dogs

Additional file 15: Table S1. Age and sex distribution of dogs involved in the study. Table S2. Correlation analysis between bacterial taxa and clinical score (CADESI-04) to select the skin sites for further analysis. Table S3. Statistical summary of the differentially abundant skin bacterial taxa at the phylum level. Table S4. Statistical summary of the differentially abundant skin bacteria at the genus level. Table S5. Correlation of Staphylococcus abundance and CADESI-04 score in each skin site was compared between dog groups. Table S6. Mean relative abundance of the 10 most abundant Staphylococcus spp. in the skin samples form healthy, cADpre, cADpost and cADtreat dogs. Data from 12 skin sites are presented. Percent identity of the best hit from NCBI Nucleotide BLAST is presented in each classified species. Table S7. Data related to Fig. 3. Statistical summary of differentially abundant Staphylococcus spp. between dog groups. Table S8. Mean relative abundance of bacterial taxa at the phylum level in faecal samples from all four dog groups. Table S9. Mean relative abundance of bacterial taxa at the genus level in the faecal samples in all four dog groups. Table S10. Statistical summary of the differentially abundant faecal and skin bacterial taxa between mtDNA haplogroups A and C.