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Per residue pair contact prediction performance using a data set of 74 sequences.

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https://figshare.com/articles/dataset/_Per_residue_pair_contact_prediction_performance_using_a_data_set_of_74_sequences_/527870
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Contact definition 1 =  A maximal distance of 8 Å between their C-beta atoms (C-alpha for glycine). 2 =  The distance between any two atoms from an interacting pair is less than the sum of their van der Waals radii plus a threshold of 0.6 Å. 3 =  The minimal distance between side chain or backbone heavy atoms in an interacting pair is less than 5.5 Å. Results for contact definition 3 used 58 sequences that had more than 2 TM helices as TMHcon is unable to make predictions for 2 TM helix sequences.
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2013-02-21
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