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Pelagomonas calceolata gene expression levels in different nitrogen conditions

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Zenodo2024-07-11 更新2026-05-26 收录
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These files contains the expression levels of Pelagomonas calceolata genes cultivated with different nitrate conditions. Two strains of P. calceolata (RCC100 and RCC697) were cultivated and their RNAs reads were aligned on the predicted genes of P. calceolata RCC100 genome: https://www.ncbi.nlm.nih.gov/Traces/wgs/CAKKNE01?display=download The following culture conditions were analysed : 882 µM of Nitrate (RCC100 and RCC697) 441 µM of Nitrate (RCC100) 220 µM of Nitrate (RCC100 and RCC697) 50 µM of Nitrate (RCC697) 882 µM Cyanate (RCC100) 882 µM Ammonia (RCC100) 441 µM Urea (RCC100) 20230427_RCC100-Nitrate_transcriptomes_rawcounts.tsv : the file contains the raw read counts of RCC100 in 6 culture conditions in triplicate + the gene names = 19 columns. 20230427_RCC100-Nitrate_transcriptomes_TPM.tsv : same data normalized in transcript per kb per million mapped reads (TPM). 20230427_RCC697-Nitrate_transcriptomes_rawcounts.tsv : the file contains the raw read counts of RCC697 of 3 culture conditions in triplicate + the gene names = 10 columns. 20230427_RCC697-Nitrate_transcriptomes_TPM.tsv : same data normalized in transcript per kb per million mapped reads (TPM).

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Zenodo
创建时间:
2024-07-10
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