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Metadata of Rotavirus A VP4 protein (Human)

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Figshare2017-02-09 更新2026-04-08 收录
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https://figshare.com/articles/dataset/Metadata_of_Rotavirus_A_VP4_protein_Human_/4635151/1
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Complete list of accession numbers of Rotavirus A VP4 proteins (Human) used in the statistical analysis of Pessia and Corander (2017). Statistical analysis done with Kpax3 (https://github.com/albertopessia/Kpax3.jl).<br><br>Data can be downloaded from NCBI's Virus Variation Resource database (https://www.ncbi.nlm.nih.gov/genome/viruses/variation/) and aligned with MUSCLE (http://www.drive5.com/muscle/).<br><br>Reference:<br>Pessia, A. and Corander, J. (2017). "<i>Bayesian cluster analysis of categorical data with supervised feature selection</i>". <i>Submitted</i>.<br><br>Brister, J. R., Bao, Y., Zhdanov, S. A., Ostapchuck, Y., Chetvernin, V., Kiryutin, B., Zaslavsky, L., Kimelman, M., and Tatusova, T. A. (2013). "<i>Virus Variation Resource - Recent Updates and Future Directions</i>". Nucleic Acids Research, 42(D1): D660-D665.<br><br>Edgar, R. C. (2004). "<i>MUSCLE: multiple sequence alignment with high accuracy and high throughput</i>". Nucleic Acids Research, 32(5): 1792-1797.<br>
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2017-02-09
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