Data from: Mei et al. 2017. Evolutionarily Conserved Alternative Splicing Across Monocots. Genetics.
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下载链接:
https://figshare.com/articles/dataset/Data_from_Evolutionarily_Conserved_Alternative_Splicing_Across_Monocots/4789153
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资源简介:
GTF file of amborella alternative splicing isoforms: Final_FilterSingleTranscriptLoci_amborella_entropyscore2_IRfilter_fpkm1frac0.05_rmEVM.gtfGTF file of arabidopsis alternative splicing isoforms: Final_FilterSingleTranscriptLoci_pasa_wmei_TAIR11_1202_Dec16_2015.pasa_assemblies.gtfGTF file of banana alternative splicing isoforms: Final_FilterSingleTranscriptLoci_banana_entropyscore2_IRfilter_fpkm1frac0.05.gtfGTF file of oil palm alternative splicing isoforms: Final_FilterSingleTranscriptLoci_oilpalm_entropyscore2_IRfilter_fpkm1frac0.05.gtfGTF file of brachypodium alternative splicing isoforms: Final_FilterSingleTranscriptLoci_brachypodium_entropyscore2_IRfilter_fpkm1frac0.05.gtfGTF file of foxtail millet alternative splicing isoforms: Final_FilterSingleTranscriptLoci_millet_entropyscore2_IRfilter_fpkm1frac0.05.gtfGTF file of rice alternative splicing isoforms: Final_FilterSingleTranscriptLoci_rice_entropyscore2_IRfilter_fpkm1frac0.05.gtf
amborella alternative splicing events table: Final_PASA_OUTPUT_pasa_wmei_amborella_Aug2_2015.indiv_splice_labels_and_coords_rmEVM.datarabidopsis alternative splicing events table: Final_PASA_OUTPUT_pasa_wmei_TAIR11_1202_Dec16_2015.indiv_splice_labels_and_coords.datbanana alternative splicing events table: Final_PASA_OUTPUT_pasa_wmei_banana_Aug2_2015.indiv_splice_labels_and_coords.datoil palm alternative splicing events table: Final_PASA_OUTPUT_pasa_wmei_oilpalm_Aug2_2015.indiv_splice_labels_and_coords.datbrachypodium alternative splicing events table: Final_PASA_OUTPUT_pasa_wmei_brachy_March19_2015.indiv_splice_labels_and_coords.datfoxtail millet alternative splicing events table: Final_PASA_OUTPUT_pasa_wmei_foxtail_March19_2015.indiv_splice_labels_and_coords.datrice alternative splicing events table: Final_PASA_OUTPUT_pasa_wmei_rice_March8_2015.indiv_splice_labels_and_coords.dat
conserved alternative splicing events table across nine species including seven species above plus maize and sorghum: conserved_fiveASevents_9species_1Dec2016_table.txt
If you use the data, please cite:Mei et al. 2017. Evolutionarily Conserved Alternative Splicing Across Monocots. Genetics.
创建时间:
2017-08-17



