Dataset for Simulation-guided engineering of split GFPs with efficient β-strand photodissociation
收藏资源简介：
Files associated with performed experiments and simulations, including source data from experimental measurements and starting structures, parameters, simulation input files, and short videos of simulation trajectories. Simulation files include: Initial coordinates of the GFP chromophore for geometry optimization and RESP calculations in GAUSSIAN Parameter and starting files for QM/MM calculations around the conical intersection in TeraChem Parameter, coordinate and input files for regular MD and simulated annealing simulations in AMBER Parameter, coordinate and input files for umbrella sampling simulations of isomerization in AMBER Additionally, short videos are included of simulations of the cis and trans conformations. Experimental source data include: UV-vis data from strand-exchange experiments Mass spectrometry data Fluorescence data
