Table S2. The output of the pipeline to investigate HERV-K proviruses and prevalence of polymorphic HERV-K proviruses in 51 LGL leukemia patients. (XLSX 68 kb)
The leukemic cell line GDM-1 was established from a patient with acute myelomonoblastic leukemia [4]. GDM-1 cells carry a reciprocal translocation t(6;7)(q23;q36) juxtaposing the transcription factor
RNA-Seq data for 1 Leukemia sample(s). 1 run(s), 1 experiment(s), 1 alignment(s). Part of BLUEPRINT release January 2015. Analysis documentation available at http://ftp.ebi.ac.uk/pub/databases/bluepri
aProbe (r) = Reverse TaqMan MGB probe; PML primer 1 for bcr1, bcr2 and bcr3; PML primer 5 for bcr1 and bcr2; PML primer 6 for bcr3Primers and probes for 3-plex RT-qPCR of PML-RARa and ABL.
