Comparative analysis of <i>covR-</i>dependent transcriptome data.

Lists of the significantly differentially expressed genes identified by RNA-sequencing analysis of ΔcovR GBS grown in THB (Ctrl) versus WT GBS grown in THB, or, ΔcovR GBS grown in THB + 0.25 mM Zn (+Zn stress) versus WT GBS grown in THB + 0.25 mM Zn, or, ΔcovR GBS grown in THB + 0.25 mM Zn versus ΔcovR GBS grown in THB (A). Genes shared and unique in the WT and ΔcovR GBS condition-to-condition comparisons of THB versus THB + 0.25 mM Zn; separated by up-regulated (B) and down-regulated genes (C). Genes shared and unique in the Ctrl vs +Zn stress conditions in strain-to-strain comparisons to dissect the effect of ΔcovR mutation; separated by up-regulated (D) and down-regulated genes (E). These were used to construct Venn diagrams in S6 Fig. (XLSX)