Host removal database: Homo sapiens, Sars-Cov-2, PhiX174

💾 cleanup-db Kraken2 database, built upon a viral sequence masked human reference from: Handley, Scott A. (2020). Virus+ Sequence Masked Human Reference Genome (hg19) (1.0) [Data set]. Zenodo. [10.5281/zenodo.4116107] but separating chromosomes as artificial taxa to allow for QC, and includes Sars-Cov-2 and PhiX 174 💾 gutcheck-db A very small DB containg some common gut bacteria and Human and Murine mitochondrial genome: Akkermansia muciniphila Bacteroides fragilis Bifidobacterium longum Blautia obeum strain Escherichia coli Enterococcus faecium Prevotella copri See: https://github.com/telatin/cleanup💾 cleanup-db 克拉肯2（Kraken2）数据库，基于病毒序列屏蔽的人类参考基因组构建，其数据源为：Handley, Scott A. (2020). Virus+ Sequence Masked Human Reference Genome (hg19) (1.0) [数据集]. Zenodo. [10.5281/zenodo.4116107]。该数据库将染色体作为人工分类单元以实现质量控制（QC），并包含严重急性呼吸综合征冠状病毒2（SARS-CoV-2）与ΦX174噬菌体。 💾 gutcheck-db 一款小型数据库，涵盖若干常见肠道细菌以及人类、鼠类线粒体基因组，具体包含以下菌种：嗜黏蛋白阿克曼氏菌（Akkermansia muciniphila）、脆弱拟杆菌（Bacteroides fragilis）、长双歧杆菌（Bifidobacterium longum）、奥氏布劳特氏菌（Blautia obeum）、大肠杆菌（Escherichia coli）、屎肠球菌（Enterococcus faecium）、柯氏普雷沃氏菌（Prevotella copri）。相关参考信息见：https://github.com/telatin/cleanup