Genome sequencing of Xiphophorus species

NIAID Data Ecosystem2026-03-12 收录

杂合性分析

结构变异检测

数据链接：

https://www.ncbi.nlm.nih.gov/sra/SRP305298 数据链接链接失效反馈

官方服务：

资源简介：

Genome sequences of Xiphophorus species were collected to identify heterozygosity, structural variance.

创建时间：

2021-05-09

Characterization of large-scale structural variants using Linked-Reads

结构变异检测

Linked-Read测序分析

Here we propose novel algorithms to characterize large (>40 Kbp) interspersed segmental duplications, (> 80 Kbp) inversions, (> 100 Kbp) deletions, and (> 100 Kbp) translocations using Linked-Read s

NIAID Data Ecosystem80

The relevance of the genome reference to resolve rare and pathogenic inversions

结构变异检测

基因组参考评估

To compare and contrast the necessity to explore mapping long-read genome sequencing data to the recently published Telomere-to-Telomere (T2T) reference genome for detection of rare and pathogenic inv

NIAID Data Ecosystem60

Long-read sequencing data from cattle for the purpose of de-novo genome assembly. Long-read sequencing of cattle

基因组组装

结构变异检测

A collection of whole-genome long-read sequencing data from individuals representing different breeds of cattle. These data are used to create reference-quality assemblies and derive structural variat

NIAID Data Ecosystem30

MOESM2 of Comparison of multiple algorithms to reliably detect structural variants in pears

结构变异检测

果树基因组学

Additional file 2. KEGG analysis of 264 genes within SVs commonly identified by five SV callers.

Figshare2020-01-20 更新70

COLO829 SV benchmark (v2)

结构变异检测

基因组基准测试

Files used to create a new Structural Variant (SV) benchmark colo the cell line COLO829 in reference genome coordinates GRCh38 and CHM13-T2T

Zenodo2024-01-01 更新40