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资源简介：
VIRGO taxon count table
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创建时间：
2023-05-24
相关数据集
Data underlying the baselines of the publication: KrakenOnMem: a memristor-augmented HW/SW framework for taxonomic profiling
Datasets and results used for the baseline evaluation of the paper titled KrakenOnMem: a memristor-augmented HW/SW framework for taxonomic profiling
4TU.ResearchData2023-09-04 更新120
Results obtained from the classification process done on the 16s datasets.
Comparison in terms of AUC, AUPRC, F1, precision, recall between relative abundance and presence/absence profiles at different threshold levels. Results are obtained using RF classification at the spe
Figshare2022-04-21 更新60
Raw Taxonomy Table
Raw taxonomy file from initial 16S processing. Used as input into CRO_drill_seqmerge_stats_reorg_avg script. Imported on line 30 of script.Also used as starting taxonomy file in the CRO_Drill_Contamin
Figshare2021-05-18 更新40
MOESM1 of Correction to: MicroPro: using metagenomic unmapped reads to provide insights into human microbiota and disease associations
Additional file 5: Table S4. Taxonomic assignments for each MAG generated from four metagenomic datasets. The corresponding Mash distance, number of matched sketches and the NCBI accession of the best
NIAID Data Ecosystem80
silva_nr_v138_train_set_usearch_SINTAX_compatible.fa
Usearch formatted silva v138 converted from dada2-format (from here: https://zenodo.org/record/3731176#.XqsLVBNKhqU)
Figshare2020-04-30 更新50
