Additional file 1 of Integrating single-cell RNA sequencing and spatial multi-omics reveals the molecular signature of regeneration after spinal cord injury
Following amputation, zebrafish regenerate their injured caudal fin through lineage-restricted reprogramming. Although previous studies have charted various genetic and epigenetic dimensions of this p
Intermediate and resultant datasets for scVEDGE are all included. See https://github.com/Lynn-nn-n/scVEDGE/ for scripts of experiments. Note that mixed_source_adata.h5ad.gz and adata_raw.h5ad.gz are
Table S4. Description of features that are used per sequence context to predict splicing, and assignment of these features to the models that include them. (XLSX 59 kb)