Seed sequence dataset

This dataset contains the primary sequences for each of the 53 conserved protein families used as seeds for our iterative, explorative homolog search procedure.The archive seed_dataset.zip contains, for each of the 53 families (labelled with a unique numerical ID):XXX.faa : amino-acid sequences of each protein in the seed familyXXX.dic : taxonomical information on the host lineage of each proteinXXX.emapper.annotations : eggnog functional annotation for the protein family sequences.The TSV file seed_dataset_info.tsv is a tab-separated, plain-text table with additional information on the protein family dataset. Data is arranged in columns as follows:FamilyID : numerical ID for each seed protein family#QuerySeqs : number of seed sequences in the family#SearchIterations : number of search iterations performed in the environmental metagenome before no new homolog is found#EnvSeqs : number of environmental homologs retrieved in total by the iterative search#EnvSeqsPerIteration : environmental homologs retrieved at each step of the iterative searchDescription : free-text description of the protein family.