TAM Atlas (Using a pan-cancer atlas to investigate tumour associated macrophages as regulators of immunotherapy response)

Included is the TAM atlas associated with the publication "Using a pan-cancer atlas to investigate tumour associated macrophages as regulators of immunotherapy response".

The atlas is a Seurat (v 4.2.0) object stored as a .rds file, which can be loaded in R (v 4.2.2).

Note this atlas does not include raw count data as these can be download from the original sources, but does include log-normalized count data, SCTransformed data and integrated data via RPCA.

The data can be loaded into R as follows:

mac.atlas <- readRDS('mac.atlas.zenodo.200524.rds')