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Supplementary Data S16 - Read end RPM for PRO-seq data around pausing sites

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Figshare2025-12-07 更新2026-04-28 收录
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https://figshare.com/articles/dataset/Supplementary_Data_S8_-_Read_end_RPM_for_PRO-seq_data_around_pausing_sites/30814652
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Supplementary Data S16 of the manuscript "Hypoxia leads to reduced mito-nuclear gene expression and to increased mtDNA transcriptional pausing in human cells" by Shtolz et al.This dataframe contains normalized read end RPM values at identified pause sites across different experimental conditions. It combines data from both mitochondrial DNA strands.Columns:cell: Cell line name (e.g., 'hela', 'u87', 'd407')treatment: Experimental condition ('Control' or 'Hypoxia')Position: Mitochondrial DNA position (1-16569) where a pause site was identifiedRead_End_RPM: Normalized read end counts (Reads Per Million) at the pause siteStrand: DNA strand where the pause site occurs ('Positive' for heavy strand or 'Negative' for light strand)
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2025-12-07
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