Repository_Darnajoux et al_2023_CSBJ

This document is a repository of all the code and dataset used for the article “A Diazotrophy-Ammoniotrophy Dual Growth Model for the sulfate-reducing bacteria Desulfovibrio vulgaris var. Hildenborough” by Darnajoux R., Inomura, K., & Zhang. X., accepted for publication in the journal Computational and Structural Biochemistry Journal in May 2023. This document regroups all the code for the function required to use the Diazotrophic-Ammoniotrophic Dual Cellular Model applied to the model Sulfate Reducing Bacteria Desulfovibrio vulgaris var. Hildenborough grown under Pyruvate and Lactate as a electron source and the validation data set from batch culture growth experiment. The final figures from this document were edited from these raw figures using Adobe Illustrator before inclusion in the article. Communication can be addressed to Romain Darnajoux (romaind(at)princeton(dot)edu or romain(dot)darnajoux(@)hotmail(dot)fr)