Rapid directed evolution guided by protein language models and epistatic interactions - Associated supplementary tables

Supplementary Tables for Tran et al. "Rapid directed evolution guided by protein language models and epistatic interactions" Table S1 protein sequences Table S10 dCasRx DMS codon Table S11 dCasRx DMS amino acid Table S12 dCasRx qPCR oligos Table S13 MULTI-assembly oligos Table S14 APEX variants Table S15 dCasRx variants Table S16 HuABC2 variants Table S2 PLM zero-shot benchmarking metrics Table S3 MULTI-evolve benchmarking training composition and encodings Table S4 MULTI-evolve benchmarking split by mutational load Table S5 Comparison of MULTI-evolve with alternative methods Table S6 Low-N benchmarking comparison of MULTI-evolve with alternative methods Table S7 Benchmarking datasets Table S8 Low-N benchmarking sampled subsets Table S9 dCasRx NGS primers