Data set - Epidemiology of <i>Burkholderia pseudomallei, </i><i>Streptococcus suis, Salmonella </i>spp., <i>Shigella</i> spp. and <i>Vibrio</i> spp. infections in 111 hospitals in Thailand, 2022

This is a data set of the study "Epidemiology of Burkholderia pseudomallei, Streptococcus suis, Salmonella spp., Shigella spp. and Vibrio spp. infections in 111 hospitals in Thailand, 2022" For "TH_2022_74_provinces_NBD.xls" Province_code: Province codes Health_region: 1 to 12. In 2022, there were 77 provinces in Thailand. The health systems in each province were integrated into 12 groups of provinces, known as health regions, plus the capital Bangkok as health region 13. Pop_2022: Population in each province in 2022 in Thailand Pig_density: Pig density, calculated by dividing total number of pigs in 2022 with total area (square kilometers) at provincial level Pig_densitiy_S: standardized Pig_densitiy, calculated by by subtracting the sample mean from each province's value of that covariate and then dividing the resultant quantity by the standard deviation of that covariate Poultry_density: Poultry density, calculated by dividing total number of pigs in 2022 with total area (square kilometers) at provincial level Poultry_density_S: standardized Poultry_density, calculated by by subtracting the sample mean from each province's value of that covariate and then dividing the resultant quantity by the standard deviation of that covariate GPP_2021: Gross Provincial Product (Million Baht) GPP_2021_S: standardized GPP_2021, calculated by by subtracting the sample mean from each province's value of that covariate and then dividing the resultant quantity by the standard deviation of that covariate Bps_PROV: Total number of patients with Burkholderia pseudomallei infection diagnosed by culture at the province. Bru_PROV: Total number of patients with Brucella spp. infection diagnosed by culture at the province. Cdi_PROV: Total number of patients with Corynebacterium diphtheriae infection diagnosed by culture at the province. Ngo_PROV: Total number of patients with Neisseria gonorrhoeae diagnosed by culture at the province. Nme_PROV: Total number of patients with Neisseria meningitidis infection diagnosed by culture at the province. Nts_PROV: Total number of patients with non-typhoidal Salmonella spp. infection diagnosed by culture at the province. Shi_PROV: Total number of patients with Shigella spp. infection diagnosed by culture at the hospital. Spa_PROV: Total number of patients with Salmonella enterica serovar Paratyphi infection diagnosed by culture at the province. Sty_PROV: Total number of patients with Salmonella enterica serovar Typhi diagnosed by culture at the province. Ssu_PROV: Total number of patients with Streptococcus suis infection diagnosed by culture at the province. Vib_PROV: Total number of patients with Vibrio spp. diagnosed by culture at the province. For "TH_2022_111_hospitals_NBD.xls" Hospital_code: Hospital codes Hospital_level: 0 defines hospital level A; 1 defines hospital level S; 2 defines hospital level M1. In 2022, there were 127 referral public hospitals in health regions 1 to 12 Thailand. These included 35 advanced-level referral hospital (i.e. level A, with a bed size of about 500-1,200 beds), 55 standard-level referral hospital (i.e. level S, with a bed size of about 300 to 500) and 37 mid-level referral hospital (i.e. level M1, with a bed size of about 180-300) Health_region: 1 to 12. In 2022, there were 77 provinces in Thailand. The health systems in each province were integrated into 12 groups of provinces, known as health regions, plus the capital Bangkok as health region 13. Number_of_records_h: Total number of hospital admissions Bed_count: Hospital bed size Perc_tested_for_CAB: Percentage of patients having blood culture taken within the first two calendar days of hospital admission Pig_density: Pig density, calculated by dividing total number of pigs in 2022 with total area (square kilometers) at provincial level Poultry_density: Poultry density, calculated by dividing total number of pigs in 2022 with total area (square kilometers) at provincial level GPP_2021: Gross Provincial Product (Million Baht) Bps_N: Total number of patients with Burkholderia pseudomallei infection diagnosed by culture at the hospital. Bru_N: Total number of patients with Brucella spp. infection diagnosed by culture at the hospital. Cdi_N: Total number of patients with Corynebacterium diphtheriae infection diagnosed by culture at the hospital. Ngo_N: Total number of patients with Neisseria gonorrhoeae diagnosed by culture at the hospital. Nme_N: Total number of patients with Neisseria meningitidis infection diagnosed by culture at the hospital. Nts_N: Total number of patients with non-typhoidal Salmonella spp. infection diagnosed by culture at the hospital. Shi_N: Total number of patients with Shigella spp. infection diagnosed by culture at the hospital. Spa_N: Total number of patients with Salmonella enterica serovar Paratyphi infection diagnosed by culture at the hospital. Sty_N: Total number of patients with Salmonella enterica serovar Typhi diagnosed by culture at the hospital. Ssu_N: Total number of patients with Streptococcus suis infection diagnosed by culture at the hospital. Vib_N: Total number of patients with Vibrio spp. diagnosed by culture at the hospital. Bps_D: Total number of deaths following cases with Burkholderia pseudomallei infection diagnosed by culture at the hospital. Bru_D: Total number of deaths following cases with Brucella spp. infection diagnosed by culture at the hospital. Cdi_D: Total number of deaths following cases with Corynebacterium diphtheriae infection diagnosed by culture at the hospital. Ngo_D: Total number of deaths following cases with Neisseria gonorrhoeae infection diagnosed by culture at the hospital. Nme_D: Total number of deaths following cases with Neisseria meningitidis infection diagnosed by culture at the hospital. Nts_D: Total number of deaths following cases with non-typhoidal Salmonella spp. infection diagnosed by culture at the hospital. Shi_D: Total number of deaths following cases with Shigella spp. infection diagnosed by culture at the hospital. Spa_D: Total number of deaths following cases with Salmonella enterica serovar Paratyphi infection diagnosed by culture at the hospital. Sty_D: Total number of deaths following cases with Salmonella enterica serovar Typhi infection diagnosed by culture at the hospital. Ssu_D: Total number of deaths following cases with Streptococcus suis infection diagnosed by culture at the hospital. Vib_D: Total number of deaths following cases with Vibrio spp. infection diagnosed by culture at the hospital. Cache files of selected references Ref 12. Department of Disease Control, Ministry of Public Health, Thailand. Communicable Disease Act B.E. 2558 (A.D. 2015). Available from: https://ddc.moph.go.th/law_gcd_eng.php Ref 21. Jongudomsuk P, Srithamrongsawat S, Patcharanarumol W, et al. The Kingdom of Thailand Health System Review. 2015. Available from: https://apo.who.int/docs/librariesprovider15/publications/hits/thailand_health_systems_review_th.pdf Ref 22. Ministry of Public Health, Thailand. List of Healthcare Facilities under Health Administration Division, Ministry of Public Health, Thailand. 2023. Available form: http://dmsic.moph.go.th/index/detail/9188 Ref 23. Department of Medical Science, Ministry of Public Health, Thailand. Laboratory manual for emerging diseases for regional and general hospitals. 2021. Available from: https://www3.dmsc.moph.go.th/download/files/dmsc_recurrence.pdf Ref 35. Department of Disease Control, Ministry of Public Health, Thailand. Guideline of Melioidosis. 2021. Available from: http://klb.ddc.moph.go.th/dataentry/handbook/form/129 Ref 40. Bangkok Post. Fighting pork smugglers. 2023. Available from: https://www.bangkokpost.com/opinion/opinion/2667934/fighting-pork-smugglers Ref 49. Healthcare Accreditation Institute, Thailand. Resource data: general data of hospitals. 2022. Available from: https://data.go.th/dataset/hospital