CFH and CFHR1-5 predicted TF binding sites

Zenodo2022-07-27 更新2026-04-07 收录

数据链接：

https://zenodo.org/record/6911658 数据链接链接失效反馈

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资源简介：

TF binding sites for CFH, CFHR1-5 as determined by PROMO (Alggen) for -1100bp to +100bp relative to transcription start site.

创建时间：

2022-07-27

TFBindFormer_dataset

转录因子预测

DNA相互作用

This dataset contains the training, validation, and test data used for transcription factor (TF)–DNA binding prediction in the TFBindFormer framework. It integrates genomic DNA sequence bins with tran

Zenodo2026-01-26 更新90

The Effect of Orthology and Coregulation on Detecting Regulatory Motifs

转录因子预测

调控基序检测

BackgroundComputational de novo discovery of transcription factor binding sites is still a challenging problem. The growing number of sequenced genomes allows integrating orthology evidence with coreg

NIAID Data Ecosystem40

TESS/TFSEARCH predicted binding motifs across the β-globin locus.

转录因子预测

珠蛋白基因调控

1Microarray data shown as fold change in expression from day 21 to day 56;2Nucleotide abbreviations: N = G, A or T; K = G or T, Y = T or C, M = A or C, R = A or G;3The Log-likelihood scores is a stati

Figshare2015-12-02 更新30

QBiC-Pred: Quantitative Predictions of Transcription Factor Binding Changes Due to Sequence Variants V. QBiC-Pred: Quantitative Predictions of Transcription Factor Binding Changes Due to Sequence Variants V

转录因子预测

基因变异功能效应

Non-coding genetic variants/mutations can play functional roles in the cell by disrupting regulatory interactions between transcription factors (TFs) and their genomic target sites. For most human TFs

NIAID Data Ecosystem50

Average AUC in cross-classification experiments.

转录因子预测

交叉分类性能评估

Table 6 indicates the average AUC score across ten classifiers where training data from one TF (rows) was used to train a classifier that classified TFBS for another TF (columns).

Figshare2015-12-02 更新30

CFH and CFHR1-5 predicted TF binding sites

资源简介：

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