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Additional file 3 of Deciphering the role of RNA in regulating CTCF’s DNA binding affinity in leukemia cells

NIAID Data Ecosystem2026-05-02 收录

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https://figshare.com/articles/dataset/Additional_file_3_of_Deciphering_the_role_of_RNA_in_regulating_CTCF_s_DNA_binding_affinity_in_leukemia_cells/29060589 数据链接链接失效反馈

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Additional file 3. Table S2 Reproducible ATAC-seq peak information

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创建时间：

2025-05-12

白血病染色质可及性

造血表观遗传学

Wild-type (CTRL) and CBFA2T3::GLIS2 induced pluripotent stem cell (iPSC) clones were differentiated into hematopoietic cells in vitro. Cells from day 13 in vitro differentiation were analysed. In addi

NIAID Data Ecosystem50

Table_3_An updated catalog of CTCF variants associated with neurodevelopmental disorder phenotypes.xlsx

神经发育障碍遗传学

CTCF转录因子

IntroductionCTCF-related disorder (CRD) is a neurodevelopmental disorder (NDD) caused by monoallelic pathogenic variants in CTCF. The first CTCF variants in CRD cases were documented in 2013. To date,

NIAID Data Ecosystem30

Cumulative in-cis mutagenesis in vivo reveals various functions for CTCF sites at the mouse Hoxd cluster [RNA-seq]. Cumulative in-cis mutagenesis in vivo reveals various functions for CTCF sites at the mouse Hoxd cluster [RNA-seq]

CTCF转录因子

小鼠Hoxd基因表达

RNA-seq analysis of the effect of CRISPR/Cas9-induced CTCF binding sites deletions on gene expression. We studied E12.5 distal or proximal forelimbs of wildtype and mutant alleles. Overall design: RNA

NIAID Data Ecosystem20

Auxin-inducible degron 2 system deciphers functions of CTCF domains in transcriptional regulation [SLAM-seq]

CTCF转录因子

转录调控机制

Background: CTCF is a well-established chromatin architectural protein that also plays various roles in transcriptional regulation. While CTCF biology has been extensively studied, how the domains of

NIAID Data Ecosystem40

Systematic assessment of ISWI subunits reveals that NURF creates local accessibility for CTCF (ATAC-Seq)

染色质可及性调控

CTCF转录因子

Catalytic activity of the ISWI family of remodelers is critical for nucleosomal organization and transcription factor binding, including the insulator protein CTCF. To define which subcomplex mediate

NIAID Data Ecosystem30

Additional file 3 of Deciphering the role of RNA in regulating CTCF’s DNA binding affinity in leukemia cells

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