Reference Gp60 sequences DB used in Gp60 amplicon sequencing uncovers the genotypic diversity of Cryptosporidium spp. between water and sediment.
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Recent research on riverbed sediment has revealed a high abundance of bacteria harboured in it, which can be resuspended and cause a large outbreak. However, the detection and molecular characterisation of pathogenic parasitic protozoa such as Cryptosporidium spp. in freshwater sediment are scarce. Therefore, this current study deciphered the prevalence, occurrence, genetic characterisation and diversity of Cryptosporidium spp. in river water and its sediment. Here is the reference Gp60 sequences used as database against the raw results submitted at PRJEB38993 (ERP122458)
既往针对河床沉积物的研究表明,其中寄居着大量可被重新悬浮并引发大规模暴发的细菌。然而,目前针对淡水沉积物中致病性寄生原生动物(如隐孢子虫属(Cryptosporidium spp.))的检测与分子特征分析研究仍较为匮乏。因此,本研究针对河水及其沉积物中的隐孢子虫属展开了流行率、检出情况、遗传特征及多样性分析。 以下为用作数据库的参考Gp60序列,用于比对提交至PRJEB38993(ERP122458)的原始测序结果。



