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Genome-wide simulation for SparsePro paper

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DataCite Commons2022-08-26 更新2024-07-29 收录
下载链接:
https://figshare.com/articles/dataset/Genome-wide_simulation_for_SparsePro_paper/20539947
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资源简介:
Genome-wide simulation data for SparsePro paper: <br> K100_W0.zip: contains 22 replicates of chromosomes simulated under no functional enricment. K100_W1.zip: contains 22 replicates of chromosomes simulated under W=1 (log-relative enrichment). K100_W2.zip: contains 22 replicates of chromosomes simulated under W=2 (log-relative enrichment). 22.idx.anno: annotation file for running functionally informed fine-mapping methods. 22.dict: dictionary for converting rsid to chr.pos.a1.a2 run_sparsepro_susie_ukb.sh: bash command for running SparsePro-/+ and SuSiE on the simulated data. run_susie_poly.sh: bash command for running PolyFun-informed SuSiE. susie_poly.py: script for running PolyFun-informed SuSiE. plot_gw_simulation.ipynb: scripts for plotting genome-wide simulation results. sparsepro_ukb.py: script for running SparsePro-/+ susie_ukb.py: script for running SuSiE
提供机构:
figshare
创建时间:
2022-08-22
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