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The Assembled Transcriptome of tidal reed and freshwater reeds in Yellow River Delta responding to salt stress

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DataCite Commons2020-08-25 更新2024-07-28 收录
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https://figshare.com/articles/The_Assembled_Transcriptome_of_tidal_reed_and_freshwater_reeds_in_Yellow_River_Delta_responding_to_salt_stress/12629885/2
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Transcriptome assemblyWe used Trinity software for transcriptome assembly. The basic process of assembly is shown in the following link: http://trinityrnaseq.github.io .The results of transcriptional assembly were as follows:1.Trinity.fasta: FASTA sequences of Trinity assembly2.cluster_ all.fasta: The sequence obtained by removing redundancy in the TRINITY.fasta by corset clustering.3.unigene.fasta: Select the longest transcript of each gene from the cluster_ all.fasta to store in FASTA format as a unigene of the gene.4.Sampled_ trinity.fasta: Some examples of Trinity.fasta sequence, and the format of the sequence is the same as the Trinity.fasta.5.Sampled_ cluster_ all.fasta: Some examples of Clusters_ all.fasta sequence, and the format of the sequence is the same as the cluster_ all.fasta.6.Sampled_ unigene.fasta: Some examples of the unigene.fasta sequence, and the format of the sequence is the same as the unigene.fasta.
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figshare
创建时间:
2020-07-18
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