a14-3-3 isoform. HGNC gene symbol given in brackets. bNumber of proteins in dataset. Number of UPC is given in brackets. cThe most significant motif of each “cloud” returned by SLiMFinder. *p<0.05, **
*SYFPEITHI prediction software was used for HLA-DR.B1-binding prediction. Each epitope has different binding affinity to various DR.B1 subtypes, which was summarized as the range of binding scores. RA
Predictive performance on different alleles and peptide lengths for the allmer and 9mer predictive methods. The two methods were trained as described in the text. The predictive performance was measur
Allele-specific length preference for 24 MHC molecules characterized by 20 or more ligand data points for the allmer and 9mer prediction methods compared to the length preference in the SYFPEITHI data
