Additional tables for "Quantitative catalogue of mammalian mitotic chromosome-associated RNAs"

We present comprehensive and quantitative characterizations of full-length mitotic chromosome-associated RNAs (mCARs) in three human cell lines (A549, ARPE-19, HT-1080), one monkey cell line (CV-1), and one mouse cell line (STO). This characterization was achieved through high-depth RNA sequencing. The enriched mCARs were identified using genomic DNA-based quantification of RNA-seq data, while the identification of unannotated RNAs relied on de novo assembly.
Here the detail information of tables are shown below.
Table S1_List of annotated mCARs in ARPE-19 ( Table S1-S1), A549 (Table S1-S2), HT-1080 (Table S1-S3), and CV-1 (Table S1-S4), STO (Table S1-S5).
Table S2_List of Novel mCARs in ARPE-19 (Table S2-S1), A549 (Table S2-S2), HT-1080 (Table S2-S3), and CV-1 (Table S2-S4), STO (Table S2-S5).
Table S3_The conversion factors needed to convert the measured TPM fold-change ratio to the proper enrichment factor for each cell-type. The final conversion factor is obtained by multiplying the slope of the qPCR fold-change vs TPM fold-change relationship (Supplementary Fig. 3) by 1/(Fraction retained).
Table S4_The primers of the target RNAs for the qPCR in human, mouse, and monkey cells.