Secale cereale Lo7 assembly. Secale cereale Lo7 assembly
收藏NIAID Data Ecosystem2026-03-12 收录
下载链接：
https://www.ncbi.nlm.nih.gov/bioproject/PRJEB35356
下载链接
链接失效反馈官方服务：
资源简介：
The data were used in the 2019 assembly of domesticated rye (Secale cereale), variety Lo7, described in Rabanus-Wallace et al. (2019). A detailed description of the assembly process is given in the Supplementary Materials. The basic assembly scaffolds were constructed from mate-paired, paired-end, and 10X Chromium linked read data, using the NRGene DeNovoMagic 3 pipeline. Scaffolds were then curated and arranged into pseudomolecules with the use of 10X Chromium data, BioNano Optical map alignments, Chromosome Sorted Shotgun data, genetic map positions lifted from the previous assembly of Bauer et al. (2017), and Hi-C conformation capture data. Raw read data of chromosome capture rye Lo7 study. Data was provided by the University of Saskatchewan, Crop Development Centre. Funding was provided by Genome Canada and Genome Prairie. Publication: https://doi.org/10.1038/s41588-021-00807-0
创建时间：
2020-12-10
