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Viral metagenomic investigation of two Caribbean echinoderms

NIAID Data Ecosystem2026-05-02 收录

病毒宏基因组

珊瑚礁棘皮动物病毒

数据链接：

https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1117494 数据链接链接失效反馈

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资源简介：

Viral metagenomes prepared from two common Caribbean coral reef echinoderms, Holothuria floridana and Diadema antillarum

应用场景：

创建时间：

2024-05-28

植物病毒发现

病毒宏基因组

Next-generation sequencing technologies enable the rapid identification of viral infection of diseased organisms. However, despite a consistent decrease in sequencing costs, it is difficult to justify

DataONE2020-06-24 更新130

Additional file 12 of VIBRANT: automated recovery, annotation and curation of microbial viruses, and evaluation of viral community function from genomic sequences

病毒辅助代谢基因注释

病毒宏基因组

Additional File 12: Table S12. List of all KEGG annotations determined as AMGs.

NIAID Data Ecosystem70

Additional file 13: of Evaluation of bias induced by viral enrichment and random amplification protocols in metagenomic surveys of saliva DNA viruses

病毒宏基因组

病毒组群落比较

Table S9. Bray-Curtis dissimilarities among saliva viromes. Table S10. Sørensen indexes among saliva viromes. Table S11. Pearson’s correlations of normalised cross-contig abundances among nine viromes

Figshare2018-06-29 更新50

Nucleotide sequences of contigs with RdRp genes

病毒宏基因组

RNA鉴定

Nucleotide sequences of contigs, which were assembled from FLDS data and identified as possible viruses with RdRp genes.

Figshare2021-11-08 更新80

human lung metagenome Metagenome. human lung metagenome

病毒宏基因组

微生物组

For viral metagenomic analysis, 25 blood samples and 25 tissue sample were collected from Sep 2018 to Aug 2019. The 50 samples were randomly pooled into 10 specimen pools, each including 5. The tissue

NIAID Data Ecosystem50

Viral metagenomic investigation of two Caribbean echinoderms

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