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The annotation of <b>Tibetan antelope </b><b>(</b><b><i>Pantholops hodgsonii</i></b><b>)</b> genome assembly

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Figshare2024-12-19 更新2026-04-08 收录
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Tibetan antelope (<i>Pantholops hodgsonii</i>), a wild ruminant endemic to the Qinghai-Tibetan Plateau (QTP) in China, has evolved a series of genetic and physiological adaptation strategies to thrive in the harsh plateau environments. However, limited research on the genome of this species exists. Here, we established a high-quality chromosome-level reference genome assembly of the Tibetan antelope using PacBio HiFi, DNBSEQ, and Hi-C sequencing data. The assembly, totaling 3.13 GB, consists of 31 chromosomes (29 + X + Y), with a Scaffold N50 length of 92.23 Mb. The quality value (QV) and Benchmarking Universal Single-Copy Ortholog (BUSCO) score were 70.14 and 98.20%, respectively, indicating that our genome sequence is of high quality and completeness. Our genome provides a valuable resource for genetic, ecological, and evolutionary research within the sub-family Caprinae, as well as genetic breeding of plateau livestock.

提供机构:
Xu, Bo
创建时间:
2024-12-19
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