VEBA Test Dataset
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https://zenodo.org/record/7943343
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资源简介：
# Testing Data
The following fastq files are subsets of the original SRA sequences designed for getting assemblies that have prokaryotic, eukaryotic, and viral genomes.
| id_sample | source_sra | format | type | num_seqs | min_len | avg_len | max_len | GC(%) ||-----------|-------------|--------|------|----------|---------|---------|---------|-------|| S1 | SRR17458614 | FASTQ | DNA | 1474203 | 75 | 150.5 | 151 | 46.91 || S2 | SRR17458615 | FASTQ | DNA | 1638398 | 75 | 150.5 | 151 | 46.92 || S3 | SRR17458630 | FASTQ | DNA | 2389989 | 75 | 150.4 | 151 | 56.38 || S4 | SRR17458638 | FASTQ | DNA | 3142566 | 75 | 150.5 | 151 | 46.34 |
Also includes the following:
Metagenomic assemblies using metaSPAdes with sorted BAM files from Bowtie2
Genomes, gene models, etc.
Taxonomy classifications at the genome and genome cluster level
Annotations for genes and protein clusters
Biosynthetic gene clusters
Clusters for genomes and proteins
创建时间：
2023-11-10
