five

Data used.

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https://figshare.com/articles/dataset/Data_used_/12384782
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For each experiment, the reads were annotated using mmannot and available annotation files. The meaning of each row follows. 1: Organism. 2: SRA id. 3: Related publication. 4: Tissue from which the RNA was extracted. 5: Number of sRNA-Seq data sets. 6: Number of reads per sample. 7: Percentage of reads which passed the quality threshold. 8: Number of mapped reads (given by BWA) in each data set. 9: Percentage of unmapped reads, i.e. the proportion of reads that cannot be placed on the genome. 10: Number of hits, i.e. the number of possible positions for the reads (given by BWA). 11: Number of features in the annotation, extracted from the annotation file. 12: Time spent by mmannot for each data set, in minutes.
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2020-05-28
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