Set of 4 597 baits designed in collaboration with RapidGenomics (Gainesville, Florida, USA) to capture the identified low‐ to single‐copy nuclear genes (LSCN).

This dataset presents a set of 4,597 baits designed in collaboration with RapidGenomics (Gainesville, Florida, USA) to capture the identified low- to single-copy nuclear genes (LSCN) in our study. These baits were instrumental in our research on the evolutionary relationships of the Neotropical magnolias based on plastome and nuclear phylogenomics. The data provided are crucial for understanding the methodology and results of our study.