Additional file 11: of Identification of candidate genes involved in Witches’ broom disease resistance in a segregating mapping population of Theobroma cacao L. in Brazil

P-values of single and multiple QTLs and haplotype combinations associated with witches’ broom disease. The first tab contains the single QTL with their different parental haplotype combinations. The different columns contain the total number of trees with each haplotype and the results of the Chi-squared test for resistance and susceptibility. The last column contains the percentage of resistant trees with the particular haplotype combination. The second and third tab contain the same info but for combinations of two and three QTL, respectively. The combinations marked in grey belong to the top five of lowest P-values and indicate the highest associations between the QTL and WBD resistance/susceptibility. (XLS 81 kb)